Search
Best hotels
Best value
When to book
Tips
FAQs
Map

Hotels in Mission Bay, San Diego

Do 25/7
Fr 26/7

Search hundreds of travel sites at once for hotels in Mission Bay

Here is why travellers choose KAYAK

Free to useThere are no hidden charges or fees.

Filter your dealsFilter by free cancellation, free breakfast and more.

Millions of reviewsCheck ratings based on millions of real guest reviews.

Best hotels in Mission Bay (San Diego)

Most recommended Mission Bay hotels

Show all
Paradise Point Resort & Spa - San Diego - Bedroom
Paradise Point Resort & Spa
8.1 Very Good
Mission Bay$760+
$760+
Free Wi-Fi
Pool
Pet friendly
Spa
Catamaran Resort Hotel and Spa - San Diego - Bedroom
Catamaran Resort Hotel and Spa
7.5 Good
Mission Bay$720+
$720+
Free Wi-Fi
Pool
Pet friendly
Spa
Bahia Resort Hotel
8.1 Very Good
Mission Bay$674+
$674+
Parking
Free Wi-Fi
Pool
Pet friendly
The Dana on Mission Bay
8 Very Good
Mission Bay$562+
$562+
Pool
Pet friendly
The Wayfarer San Diego
8.5 Very Good
Mission Bay$689+
$689+
Free Wi-Fi
Pool
Devon Getaway
8.6 Very Good
Mission Bay$947+
$947+
Free Wi-Fi
Beach Baller Bungalow
3 Poor
Mission Bay$513+
$513+
Free Wi-Fi

How much is a Mission Bay hotel?

Here are our most popular & best value hotels

2 stars and below

3 stars

4 stars and above

Good to know

Low season

February

High season

June
Cheapest month to stay with an average 51% drop in price.
Most expensive month to stay with an average 32% rise in price.

When to book a hotel in Mission Bay

Price per night / 3-star hotel. Prices are not fixed and may vary with time.
Average nightly price per month
Average nightly price

Top tips for finding a hotel deal in Mission Bay

  • If you’re looking for a cheap hotel in Mission Bay, you should consider going during the low season. You’ll generally find lower-priced hotels in Mission Bay in October and June.
  • For the lowest prices, try to book your Mission Bay hotel more than 90 days before your stay.
  • Not sure just how much there is to see and do in Mission Bay? KAYAK users usually book their hotel here for 3 days.

FAQs when booking a hotel in Mission Bay

  • What are the best hotels in Mission Bay?

    Mission Bay is a great part of San Diego to make your base. If you’re staying in Mission Bay area then Hyatt Regency Mission Bay Spa And Marina, Paradise Point Resort & Spa, and San Diego Mission Bay Resort are all recommended on KAYAK.

  • How much does a hotel in Mission Bay (San Diego) cost?

    The average price for a hotel room in Mission Bay is $271 but our users have found deals for as low as $76. However, hotel prices in Mission Bay vary a lot depending on the type of hotel, the time of year and more factors.

  • How much is a hotel in Mission Bay for tonight?

    If you’re looking for a last minute deal, the best price a KAYAK user has found for a 3-star hotel in Mission Bay in the last 3 hours was $420 and the lowest priced 4-star hotel was $503. The best price found on KAYAK for a hotel room in Mission Bay for tonight is $171.

  • How much is a hotel in Mission Bay for this weekend?

    In the last 72 hours, KAYAK users have found hotel deals in Mission Bay for this weekend for as low as $141 per night. Users have also found 3-star hotels from $519 and 4-star hotels from $519.

  • Which hotels in Mission Bay are romantic?

    If you’re looking for a romantic break with your partner in Mission Bay, then why not stay at Paradise Point Resort & Spa, Bahia Resort Hotel, or San Diego Mission Bay Resort, which have been recommended by KAYAK users as great for couples.

Where to stay in Mission Bay?

Our map will help you find the perfect hotel in Mission Bay, San Diego by showing you the exact location of each hotel.

What Mission Bay hotel guests are talking about

Show all

What Mission Bay hotel guests are talking about

Hotels about topic

Show all
Bahia Resort Hotel - San Diego - Balcony
Bahia Resort Hotel
8.1 Very Good
Mission Bay$674+
$674+
Parking
Free Wi-Fi
Pool
Pet friendly
The Dana on Mission Bay - San Diego - Building
The Dana on Mission Bay
8 Very Good
Mission Bay$562+
$562+
Pool
Pet friendly
The Wayfarer San Diego
8.5 Very Good
Mission Bay$689+
$689+
Free Wi-Fi
Pool
Catamaran Resort Hotel and Spa
7.5 Good
Mission Bay$720+
$720+
Free Wi-Fi
Pool
Pet friendly
Spa

Popular topics